The GenoEx platform is created to allow worldwide exchange of SNP data in an efficient and secure way.
It provides two alternative services, depending on the customers’ needs:
limited Parentage SNP Exchange (GenoEx-PSE) and full Genomic Data Exchange (GenoEx-GDE).
• GenoEx-PSE allows exchange of limited sets of SNPs, with sets standardised for parentage analysis
- to facilitate and streamline the activities carried out by organisations
that are responsible and/or active in parentage integrity.
• GenoEx-GDE is extended to full genotypes exchange, access controlled fully by the data owners
and it covers a variety of available genotyping chips.
Lists of recognized Platform-Array Combinations, Genotyping laboratories, Breeds and Countries:
• System data page (also accessible via the header)
• GenoEx-PSE user manual and file formats
• GenoEx-PSE Code of Practice
• GenoEx-PSE SNP list for parentage verification
• GenoEx-PSE SNP list for parentage discovery
• GenoEx-PSE webinar recording (about 21min + 13min Q&A)
• GenoEx-GDE File Preparation Manual (gxprep)
• GenoEx-GDE Database Manual
• GenoEx-GDE API Manual (including gxapi)
Organisations wishing to join GenoEx-PSE services shall:
1. Be a member of ICAR or be nominated by an ICAR member;
2. Have a valid “ICAR Accreditation for DNA Interpretation Centres”;
3. Sign a Service User Agreement with the Interbull Centre.
Please use GenoEx@slu.se to report any bugs, errors or to pose questions or propose improvements!
Interbull Centre
Department of Animal Biosciences - SLU
Box 7023, SE-750 07
Uppsala, Sweden